View on GitHub

cancer-incidence-v5

Code associated to manuscript on age-specific cancer incidence rates by Richardson, Anghel and Deng

Directory Structure

+---data
|   +---population
|   |   +---2000
|   |   |   +---2000-Alaska-native
|   |   |   +---2000-California-counties
|   |   |   +---2000-Detroit-metro
|   |   |   +---2000-Georgia-counties
|   |   |   +---2000-states
|   |   |   \---2000-Washington-counties
|   |   \---2010
|   |       +---2010-Alaska-native
|   |       +---2010-California-counties
|   |       +---2010-Detroit-metro
|   |       +---2010-Georgia-counties
|   |       +---2010-states
|   |       \---2010-Washington-counties
|   +---seer
|   \---seer-tcga
|       +---ACC
|       +---BLCA
|       +---BRCA
|       +---CESC
|       +---COAD
|       +---ESCA
|       +---GBM
|       +---HNSC
|       +---KICH
|       +---KIRC
|       +---KIRP
|       +---LAML
|       +---LGG
|       +---LIHC
|       +---LUAD
|       +---LUSC
|       +---MESO
|       +---OV
|       +---PAAD
|       +---PCPG
|       +---PRAD
|       +---READ
|       +---SARC
|       +---SKCM
|       +---STAD
|       +---TGCT
|       +---THCA
|       +---THYM
|       +---UCEC
|       \---UCS
+---docs
+---outputs
|   +---population
|   +---seer
|   |   +---count-data
|   |   |   \---error-plots
|   |   +---fits
|   |   |   +---fit03-Harding
|   |   |   \---fit04-Gamma
|   |   \---seer-checks
|   \---seer-tcga
|       +---count-data
|       |   \---error-plots
|       +---fits
|       |   +---fit03-Harding
|       |   \---fit04-Gamma
|       \---mutations
\---scripts
    +---census-population
    +---incidence-seer
    +---incidence-seer-tcga
    +---model-fits
    +---plot-fits
    \---util

Return to main page